CDS

Accession Number TCMCG017C33775
gbkey CDS
Protein Id OMO53993.1
Location complement(join(18975..18977,19068..19196,19282..19356,19566..19649,19909..20064,20882..20935,21088..21207,21287..21439,21506..21578,22722..22813,22939..23037,23152..23235,23833..23896,24128..24204,24309..24443,25389..25434,25518..25579,25678..25749))
GeneID InterPro:IPR007259
Organism Corchorus olitorius
locus_tag COLO4_36604

Protein

Length 525aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01023376.1
Definition Spc97/Spc98 [Corchorus olitorius]
Locus_tag COLO4_36604

EGGNOG-MAPPER Annotation

COG_category Z
Description Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
ko04812        [VIEW IN KEGG]
KEGG_ko ko:K16569        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000226        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000923        [VIEW IN EMBL-EBI]
GO:0000930        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005198        [VIEW IN EMBL-EBI]
GO:0005200        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005815        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0005874        [VIEW IN EMBL-EBI]
GO:0005881        [VIEW IN EMBL-EBI]
GO:0005938        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0007017        [VIEW IN EMBL-EBI]
GO:0007020        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007051        [VIEW IN EMBL-EBI]
GO:0007052        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008092        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008275        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010638        [VIEW IN EMBL-EBI]
GO:0010968        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015630        [VIEW IN EMBL-EBI]
GO:0015631        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030863        [VIEW IN EMBL-EBI]
GO:0030981        [VIEW IN EMBL-EBI]
GO:0031109        [VIEW IN EMBL-EBI]
GO:0031110        [VIEW IN EMBL-EBI]
GO:0031112        [VIEW IN EMBL-EBI]
GO:0031113        [VIEW IN EMBL-EBI]
GO:0031116        [VIEW IN EMBL-EBI]
GO:0031122        [VIEW IN EMBL-EBI]
GO:0031334        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032153        [VIEW IN EMBL-EBI]
GO:0032155        [VIEW IN EMBL-EBI]
GO:0032271        [VIEW IN EMBL-EBI]
GO:0032273        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032886        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033566        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034629        [VIEW IN EMBL-EBI]
GO:0043015        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043254        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044089        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044448        [VIEW IN EMBL-EBI]
GO:0044450        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046785        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051130        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051225        [VIEW IN EMBL-EBI]
GO:0051258        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051415        [VIEW IN EMBL-EBI]
GO:0051418        [VIEW IN EMBL-EBI]
GO:0051493        [VIEW IN EMBL-EBI]
GO:0051495        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0055028        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070507        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090063        [VIEW IN EMBL-EBI]
GO:0090307        [VIEW IN EMBL-EBI]
GO:0097435        [VIEW IN EMBL-EBI]
GO:0099080        [VIEW IN EMBL-EBI]
GO:0099081        [VIEW IN EMBL-EBI]
GO:0099512        [VIEW IN EMBL-EBI]
GO:0099513        [VIEW IN EMBL-EBI]
GO:0099568        [VIEW IN EMBL-EBI]
GO:0140014        [VIEW IN EMBL-EBI]
GO:1902850        [VIEW IN EMBL-EBI]
GO:1902903        [VIEW IN EMBL-EBI]
GO:1902905        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAATCAAGTTGCCCTTCAACACCTCGCTGGAACATCGACAGACCATTCCTCACCGGCCGATTTCATCAGGAAATAAATGGCACATCTCGGTTCGCAGCTGATGCGAAAGGGTTTTCCCCGGATTCTTTTAGCTCAGGATTGGAAAACCCAATTGGTTGTTATGATGCGGCAGTACAGGAACTTATTGTCATTGATGATCTCCTATTTGCTTTGGTTGGAATTGAAGGGCGATACATTTCAATAAAAAAAGTGCATGGAAAGGATGATGCTGTTACTTTCCAGGTTGATGCATCTATGGATTTGGCACTTCAGTCCTCTGTGATGCTGCCAGGGGAACCTATGGCTTATGCTTCGGTTAACATAAAATGCGGCATGTCTTATAGCTCTGGATCTCAGTTTAAGAATGGCCTAGTCAATCATGCTTTTGCCGCTGCGTTGAGGGCACTGCTTTTGGATTATCAGGCCATGGTTGCACAGCTTGAACACCAATTTCGACTTGGAAAACTTTCCATTCAAGGATTGTGGTTTTATTGTCAGCCAATGATGGGGTCCATGCAAGCATTGGCCAGTGTGATACAGAAGGCCTCAGCTAATAATTACACCGGCTCTGCGGTGCTTAATTTGTTACAGAGCCAGGCTAAGGCTATGGCTGGTGACAGTGCAGTGAGGTCTTTGCTAGAGAAAATGACCCAATCTGCTAGCAATGCATACCTAAGCATATTGGAAAGGTGGATCTATGAGGGAGCCATTGATGATCCATATGGTGAATTTTTTATTGCCGAGAATAAGTCACTCCAAAAGGATAGCCTTACTCAAGATTATGATGCTAAGTATTGGAGGCAACGTTACAGTCTCAAGGAGGACATTCCTAGCTTCCTTGCAAATATTGCTGGTATAATATTGACGACAGGGAAATATCTGAATGTCATGAGGGAATGCGGGCATAATGTTCAGGTCCCTGTCTCTGAAAATTCTAAATTAATGACTTTGGCTTCCAACCATCACTATCTTGAATGTGTAAAAGCTGCTTATGAATTTGCCAGTGGCGAGCTCTTAAGTCTTATCAAAGAAAAGTATGATTTAATAGGAAAGCTGCGGTCTATAAAGCATTATCTTCTTCTTGACCAGGCCACAGTCACATGCCCTGCTAGCACACCCATAGTTGTGAGACTTCCTTCACATGGCCCATTCGCACCGCCTGCCTCTATGGCTTTGGCTGGGCCATCCTGCTCATTTTTCCGCTCTATGGTAGCTGTTGGAAAAGTCATTCTAGGCATACAGAGGGGTGATTTCTTGGTTCATTTTATGGATATAGCGCGAGAGGAGCTCTTAAAAAAACATGATGAAATTTCTGTGGAAAAACTGCAGTCTCTGCTGGATCTTGCTTTGCGTACCACAGCTGCTGCAGCTGATCCTTGTCATGAAGACTTAACATGTTGTGTGGAGAGAACTTCAGTTTTAAAAGGATTAAGCACACTTAAGGATGTTAATATCAGGGACGTATCTGATAGCAATGACTTAGAGGAGCCAATAAGCATAACTGGTCTTGAGACATTTTCCTTGAGCTATAAGTAG
Protein:  
MESSCPSTPRWNIDRPFLTGRFHQEINGTSRFAADAKGFSPDSFSSGLENPIGCYDAAVQELIVIDDLLFALVGIEGRYISIKKVHGKDDAVTFQVDASMDLALQSSVMLPGEPMAYASVNIKCGMSYSSGSQFKNGLVNHAFAAALRALLLDYQAMVAQLEHQFRLGKLSIQGLWFYCQPMMGSMQALASVIQKASANNYTGSAVLNLLQSQAKAMAGDSAVRSLLEKMTQSASNAYLSILERWIYEGAIDDPYGEFFIAENKSLQKDSLTQDYDAKYWRQRYSLKEDIPSFLANIAGIILTTGKYLNVMRECGHNVQVPVSENSKLMTLASNHHYLECVKAAYEFASGELLSLIKEKYDLIGKLRSIKHYLLLDQATVTCPASTPIVVRLPSHGPFAPPASMALAGPSCSFFRSMVAVGKVILGIQRGDFLVHFMDIAREELLKKHDEISVEKLQSLLDLALRTTAAAADPCHEDLTCCVERTSVLKGLSTLKDVNIRDVSDSNDLEEPISITGLETFSLSYK